BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039E01SP1|AL430707
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1652 1545 0.0
>3x_Contig1652
Length = 14842
Score = 1545 bits (776), Expect = 0.0
Identities = 791/797 (99%), Gaps = 1/797 (0%)
Strand = Plus / Plus
Query: 118 ccagctgtggtgctgataaagagggtttcttctttggtttcaaaaagcaggtcaagtcaa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ccagctgtggtgctgataaagagggtttcttctttggtttcaaaaagcaggtcaagtcaa 62
Query: 178 atgttacaaataactctgngatctcttttgtggaagatcaaaaggattacaccgcttctc 237
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgttacaaataactctgagatctcttttgtggaagatcaaaaggattacaccgcttctc 122
Query: 238 cagtaatactttgcccaaaacacataagahgtccagaattagttccattccattatagag 297
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 123 cagtaatactttgcccaaaacacataagaagtccagaattagttccattccattatagag 182
Query: 298 ttagagactcagatatatctttgatgaaattattcataagggagcagaaatttgatcctc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttagagactcagatatatctttgatgaaattattcataagggagcagaaatttgatcctc 242
Query: 358 aatttgagactttgtctacgatccaacttacgcattcatgcgcgtgagcagttaaggaag 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 243 aatttgagactttgtctacgatccaactt-cgcattcatgcgcgtgagcagttaaggaag 301
Query: 418 atgttgtctgtgagtatggactattcagtttcaaaagaatcaaaaataaccaatggtgtt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atgttgtctgtgagtatggactattcagtttcaaaagaatcaaaaataaccaatggtgtt 361
Query: 478 tctaatgtacaaatcccagtacatggttcctgctcccgcaatgaacttctatcagcagtt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tctaatgtacaaatcccagtacatggttcctgctcccgcaatgaacttctatcagcagtt 421
Query: 538 gctgttaataatgggatgcttatgatccccgaagtggataaagaggaattggtagaatat 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gctgttaataatgggatgcttatgatccccgaagtggataaagaggaattggtagaatat 481
Query: 598 cccgtagatccaccaagagatcgtagttctcgattgcttgcctcaacaggtacttcgttt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cccgtagatccaccaagagatcgtagttctcgattgcttgcctcaacaggtacttcgttt 541
Query: 658 acggcgtttggatcagaaaaatgtaatgctaagattgcccaacaaaaggctamtaaaaga 717
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 542 acggcgtttggatcagaaaaatgtaatgctaagattgcccaacaaaaggctactaaaaga 601
Query: 718 atcagaaacaaaaacatcaacgagccagacagtcaacaagtgaagctagaggagggcgct 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atcagaaacaaaaacatcaacgagccagacagtcaacaagtgaagctagaggagggcgct 661
Query: 778 gttccaatggctccaatagtggttcaaattccaccaaaaattaataatattgabagaact 837
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 662 gttccaatggctccaatagtggttcaaattccaccaaaaattaataatattgaaagaact 721
Query: 838 atacttccggagaaattatagaagcggagacgagtacatattcataatatataadcgatg 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 722 atacttccggagaaattatagaagcggagacgagtacatattcataatatataaacgatg 781
Query: 898 tattgagtttttttcct 914
|||||||||||||||||
Sbjct: 782 tattgagtttttttcct 798
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7031
Number of Sequences: 1807
Number of extensions: 7031
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)